RNA-Seq data analysis with Galaxy for clinical applications
Markus Wolfien, University of Rostock
Andrea Bagnacani, University of Rostock
Day: Friday, September 11
Length of tutorial: full day
Technical level: medium
The tutorial aims at getting participants familiar with: (i) the Galaxy framework for carrying out scientific data analyses, (ii) methods for data, exploration and quality control of NGS datasets, (iii) concepts underlying genome alignment and data visualization of subsequent results.
We provide a summary of the current use and future applications of Next Generation Sequencing (NGS) technologies in the clinical context. This is carried out with a hands-on session on RNA-Seq data analysis, and a demonstration of a real-life scenario to showcase data analysis of clinical NGS datasets.
Institute of Biometry and Clinical Epidemiology
Charité - Universitätsmedizin Berlin & Berlin Institute of Health